INFO: SVN version, compile time, version >>> $Id: FindER_1_0_0.java 127368 2017-02-15 23:46:04Z mbilenky $	v 1.0.1e
####################################################################################
#
# v 1.0.1e (beta), February 15, 2017 : Please report problems to:  mbilenky@bcgsc.ca
#
####################################################################################
INFO: SVN version, compile time >>> $Id: BAMReader_1_0_0.java 125718 2016-12-06 04:23:24Z mbilenky $
INFO: analyzing bam file >>> /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam
INFO: using samtools >>> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools
INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -h /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam
INFO: generated chromosome length map for 84 chromosomes
INFO: read length 75 bp
INFO: SVN version, compile time >>> $Id: BAMReader_1_0_0.java 125718 2016-12-06 04:23:24Z mbilenky $
INFO: analyzing bam file >>> /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam
INFO: using samtools >>> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools
INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -h /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam
INFO: generated chromosome length map for 84 chromosomes
INFO: read length 75 bp
INFO: no external blacklisting.
INFO: outputting enriched regions (ER) into /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/FindER.1.0.1e-A77362.CBTEAANXX_2.v.A77366/A77362.CBTEAANXX_2.vs.A77366.CBTEAANXX_2.FDR_0.05

INFO: profiling region >>> GL000199.1:1-169874
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000199.1:1-169874
. 1025 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000199.1:1-169874
. 5534 fragments are accepted.
INFO: generating distance distribution between fragment starts ... INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view  -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000199.1:1-169874
 inferred bin size 120 (bp). [will be used to bin 'signal' and 'input']


WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000219.1:1-179198
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000219.1:1-179198
. 715 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000219.1:1-179198
. 2385 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000217.1:1-172149
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000217.1:1-172149
. 71 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000217.1:1-172149
. 301 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000191.1:1-106433
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000191.1:1-106433
. 79 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000191.1:1-106433
. 134 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000193.1:1-189789
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000193.1:1-189789
. 649 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000193.1:1-189789
. 2701 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000195.1:1-182896
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000195.1:1-182896
. 1817 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000195.1:1-182896
. 4176 fragments are accepted.
WARNING: no significant bins (FDR=0.05)...
WARNING: no significant bins (FDR=0.05)...
WARNING: no significant bins (FDR=0.05)...
WARNING: no significant bins (FDR=0.05)...
WARNING: ZERO enriched reagions are found ...

INFO: profiling region >>> GL000197.1:1-37175
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000197.1:1-37175
. 3 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000197.1:1-37175
. 2 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000230.1:1-43691
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000230.1:1-43691
. 53 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000230.1:1-43691
. 213 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000236.1:1-41934
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000236.1:1-41934
. 9 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000236.1:1-41934
. 29 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000211.1:1-166566
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000211.1:1-166566
. 215 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000211.1:1-166566
. 1055 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000232.1:1-40652
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000232.1:1-40652
. 330 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000232.1:1-40652
. 1424 fragments are accepted.
WARNING: no significant bins (FDR=0.05)...
WARNING: no significant bins (FDR=0.05)...
WARNING: no significant bins (FDR=0.05)...
WARNING: no significant bins (FDR=0.05)...
WARNING: ZERO enriched reagions are found ...

INFO: profiling region >>> GL000238.1:1-39939
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000238.1:1-39939
. 14 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000238.1:1-39939
. 37 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000215.1:1-172545
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000215.1:1-172545
. 3 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000215.1:1-172545
. 53 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> 10:1-135534747
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam 10:1-135534747
. 412504 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam 10:1-135534747
.. 984629 fragments are accepted.
INFO: merging enriched regions if gap size < 125(bp), and discarding enriched regions with size < 175(bp)
INFO: number of enriched regions after final processing 11597 [total length = 4186517 (bp), fraction of region length = 0.030889] with fraction of all sequences found in enriched regions = 0.140355

INFO: profiling region >>> GL000234.1:1-40531
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000234.1:1-40531
. 256 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000234.1:1-40531
. 1223 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000213.1:1-164239
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000213.1:1-164239
. 18 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000213.1:1-164239
. 128 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> 11:1-135006516
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam 11:1-135006516
. 441749 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam 11:1-135006516
.. 963618 fragments are accepted.
INFO: merging enriched regions if gap size < 125(bp), and discarding enriched regions with size < 175(bp)
INFO: number of enriched regions after final processing 12441 [total length = 3371511 (bp), fraction of region length = 0.024973] with fraction of all sequences found in enriched regions = 0.139772

INFO: profiling region >>> 12:1-133851895
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam 12:1-133851895
. 420464 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam 12:1-133851895
.. 936004 fragments are accepted.
INFO: merging enriched regions if gap size < 125(bp), and discarding enriched regions with size < 175(bp)
INFO: number of enriched regions after final processing 10737 [total length = 2909727 (bp), fraction of region length = 0.021738] with fraction of all sequences found in enriched regions = 0.117768

INFO: profiling region >>> GL000209.1:1-159169
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000209.1:1-159169
. 156 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000209.1:1-159169
. 199 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> 13:1-115169878
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam 13:1-115169878
. 190814 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam 13:1-115169878
.. 605777 fragments are accepted.
WARNING: no significant bins (FDR=0.05)...
WARNING: no significant bins (FDR=0.05)...
WARNING: no significant bins (FDR=0.05)...
INFO: merging enriched regions if gap size < 125(bp), and discarding enriched regions with size < 175(bp)
INFO: number of enriched regions after final processing 3796 [total length = 459316 (bp), fraction of region length = 0.003988] with fraction of all sequences found in enriched regions = 0.075305

INFO: profiling region >>> 14:1-107349540
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam 14:1-107349540
. 273465 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam 14:1-107349540
.. 623518 fragments are accepted.
INFO: merging enriched regions if gap size < 125(bp), and discarding enriched regions with size < 175(bp)
INFO: number of enriched regions after final processing 7732 [total length = 1863412 (bp), fraction of region length = 0.017358] with fraction of all sequences found in enriched regions = 0.125702

INFO: profiling region >>> GL000207.1:1-4262
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000207.1:1-4262
. 3 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000207.1:1-4262
. 40 fragments are accepted.
WARNING: ZERO enriched reagions are found ...

INFO: profiling region >>> GL000228.1:1-129120
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000228.1:1-129120
. 206 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000228.1:1-129120
. 570 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> 15:1-102531392
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam 15:1-102531392
. 297312 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam 15:1-102531392
.. 578219 fragments are accepted.
INFO: merging enriched regions if gap size < 125(bp), and discarding enriched regions with size < 175(bp)
INFO: number of enriched regions after final processing 7272 [total length = 2625192 (bp), fraction of region length = 0.025604] with fraction of all sequences found in enriched regions = 0.120944

INFO: profiling region >>> 16:1-90354753
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam 16:1-90354753
. 360562 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam 16:1-90354753
.. 651325 fragments are accepted.
INFO: merging enriched regions if gap size < 125(bp), and discarding enriched regions with size < 175(bp)
INFO: number of enriched regions after final processing 7237 [total length = 1961227 (bp), fraction of region length = 0.021706] with fraction of all sequences found in enriched regions = 0.122084

INFO: profiling region >>> 17:1-81195210
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam 17:1-81195210
. 458058 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam 17:1-81195210
.. 671556 fragments are accepted.
INFO: merging enriched regions if gap size < 125(bp), and discarding enriched regions with size < 175(bp)
INFO: number of enriched regions after final processing 7313 [total length = 3956333 (bp), fraction of region length = 0.048726] with fraction of all sequences found in enriched regions = 0.104030

INFO: profiling region >>> 18:1-78077248
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam 18:1-78077248
. 166885 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam 18:1-78077248
. 491445 fragments are accepted.
WARNING: no significant bins (FDR=0.05)...
WARNING: no significant bins (FDR=0.05)...
WARNING: no significant bins (FDR=0.05)...
WARNING: no significant bins (FDR=0.05)...
WARNING: ZERO enriched reagions are found ...

INFO: profiling region >>> MT:1-16569
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam MT:1-16569
. 262 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam MT:1-16569
. 143 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> 19:1-59128983
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam 19:1-59128983
. 406231 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam 19:1-59128983
.. 544253 fragments are accepted.
INFO: merging enriched regions if gap size < 125(bp), and discarding enriched regions with size < 175(bp)
INFO: number of enriched regions after final processing 5260 [total length = 1267660 (bp), fraction of region length = 0.021439] with fraction of all sequences found in enriched regions = 0.096409

INFO: profiling region >>> 1:1-249250621
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam 1:1-249250621
.. 851188 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam 1:1-249250621
.... 1690498 fragments are accepted.
INFO: merging enriched regions if gap size < 125(bp), and discarding enriched regions with size < 175(bp)
INFO: number of enriched regions after final processing 20942 [total length = 5047022 (bp), fraction of region length = 0.020249] with fraction of all sequences found in enriched regions = 0.128489

INFO: profiling region >>> 2:1-243199373
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam 2:1-243199373
.. 637804 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam 2:1-243199373
.... 1661734 fragments are accepted.
INFO: merging enriched regions if gap size < 125(bp), and discarding enriched regions with size < 175(bp)
INFO: number of enriched regions after final processing 20582 [total length = 4960262 (bp), fraction of region length = 0.020396] with fraction of all sequences found in enriched regions = 0.123228

INFO: profiling region >>> 3:1-198022430
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam 3:1-198022430
.. 503716 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam 3:1-198022430
... 1345003 fragments are accepted.
INFO: merging enriched regions if gap size < 125(bp), and discarding enriched regions with size < 175(bp)
INFO: number of enriched regions after final processing 17318 [total length = 3654098 (bp), fraction of region length = 0.018453] with fraction of all sequences found in enriched regions = 0.125880

INFO: profiling region >>> GL000241.1:1-42152
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000241.1:1-42152
. 244 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000241.1:1-42152
. 1019 fragments are accepted.
WARNING: no significant bins (FDR=0.05)...
WARNING: no significant bins (FDR=0.05)...
WARNING: no significant bins (FDR=0.05)...
WARNING: no significant bins (FDR=0.05)...
WARNING: ZERO enriched reagions are found ...

INFO: profiling region >>> 4:1-191154276
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam 4:1-191154276
. 365938 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam 4:1-191154276
... 1195261 fragments are accepted.
WARNING: no significant bins (FDR=0.05)...
WARNING: no significant bins (FDR=0.05)...
INFO: merging enriched regions if gap size < 125(bp), and discarding enriched regions with size < 175(bp)
INFO: number of enriched regions after final processing 10238 [total length = 4003058 (bp), fraction of region length = 0.020942] with fraction of all sequences found in enriched regions = 0.095766

INFO: profiling region >>> 5:1-180915260
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam 5:1-180915260
. 417413 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam 5:1-180915260
... 1178056 fragments are accepted.
INFO: merging enriched regions if gap size < 125(bp), and discarding enriched regions with size < 175(bp)
INFO: number of enriched regions after final processing 13575 [total length = 3678825 (bp), fraction of region length = 0.020335] with fraction of all sequences found in enriched regions = 0.115451

INFO: profiling region >>> 6:1-171115067
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam 6:1-171115067
. 450251 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam 6:1-171115067
... 1174330 fragments are accepted.
INFO: merging enriched regions if gap size < 125(bp), and discarding enriched regions with size < 175(bp)
INFO: number of enriched regions after final processing 14212 [total length = 9394132 (bp), fraction of region length = 0.054899] with fraction of all sequences found in enriched regions = 0.127697

INFO: profiling region >>> 7:1-159138663
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam 7:1-159138663
. 411299 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam 7:1-159138663
... 1096320 fragments are accepted.
INFO: merging enriched regions if gap size < 125(bp), and discarding enriched regions with size < 175(bp)
INFO: number of enriched regions after final processing 12337 [total length = 2973217 (bp), fraction of region length = 0.018683] with fraction of all sequences found in enriched regions = 0.108072

INFO: profiling region >>> 8:1-146364022
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam 8:1-146364022
. 350416 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam 8:1-146364022
.. 970922 fragments are accepted.
INFO: merging enriched regions if gap size < 125(bp), and discarding enriched regions with size < 175(bp)
INFO: number of enriched regions after final processing 12768 [total length = 3460128 (bp), fraction of region length = 0.023641] with fraction of all sequences found in enriched regions = 0.125381

INFO: profiling region >>> 9:1-141213431
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam 9:1-141213431
. 375342 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam 9:1-141213431
.. 805479 fragments are accepted.
INFO: merging enriched regions if gap size < 125(bp), and discarding enriched regions with size < 175(bp)
INFO: number of enriched regions after final processing 10873 [total length = 3272773 (bp), fraction of region length = 0.023176] with fraction of all sequences found in enriched regions = 0.131708

INFO: profiling region >>> GL000201.1:1-36148
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000201.1:1-36148
. 5 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000201.1:1-36148
. 5 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000247.1:1-36422
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000247.1:1-36422
. 15 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000247.1:1-36422
. 54 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000222.1:1-186861
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000222.1:1-186861
. 88 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000222.1:1-186861
. 448 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000249.1:1-38502
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000249.1:1-38502
. 2 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000249.1:1-38502
. 5 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000220.1:1-161802
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000220.1:1-161802
. 24049 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000220.1:1-161802
. 36529 fragments are accepted.
WARNING: no significant bins (FDR=0.05)...
WARNING: no significant bins (FDR=0.05)...
WARNING: no significant bins (FDR=0.05)...
WARNING: no significant bins (FDR=0.05)...
WARNING: ZERO enriched reagions are found ...

INFO: profiling region >>> GL000226.1:1-15008
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000226.1:1-15008
. 496 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000226.1:1-15008
. 1890 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000243.1:1-43341
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000243.1:1-43341
. 31 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000243.1:1-43341
. 124 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000205.1:1-174588
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000205.1:1-174588
. 1527 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000205.1:1-174588
. 3797 fragments are accepted.
WARNING: no significant bins (FDR=0.05)...
INFO: merging enriched regions if gap size < 125(bp), and discarding enriched regions with size < 175(bp)
INFO: number of enriched regions after final processing 17 [total length = 3077 (bp), fraction of region length = 0.017624] with fraction of all sequences found in enriched regions = 0.171124

INFO: profiling region >>> 20:1-63025520
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam 20:1-63025520
. 272450 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam 20:1-63025520
. 483472 fragments are accepted.
INFO: merging enriched regions if gap size < 125(bp), and discarding enriched regions with size < 175(bp)
INFO: number of enriched regions after final processing 5280 [total length = 1272480 (bp), fraction of region length = 0.020190] with fraction of all sequences found in enriched regions = 0.113603

INFO: profiling region >>> 21:1-48129895
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam 21:1-48129895
. 116439 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam 21:1-48129895
. 261519 fragments are accepted.
INFO: merging enriched regions if gap size < 125(bp), and discarding enriched regions with size < 175(bp)
INFO: number of enriched regions after final processing 2785 [total length = 1840885 (bp), fraction of region length = 0.038248] with fraction of all sequences found in enriched regions = 0.115676

INFO: profiling region >>> GL000245.1:1-36651
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000245.1:1-36651
. 11 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000245.1:1-36651
. 32 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000203.1:1-37498
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000203.1:1-37498
. 27 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000203.1:1-37498
. 111 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000224.1:1-179693
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000224.1:1-179693
. 949 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000224.1:1-179693
. 3291 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> 22:1-51304566
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam 22:1-51304566
. 223972 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam 22:1-51304566
. 312012 fragments are accepted.
INFO: merging enriched regions if gap size < 125(bp), and discarding enriched regions with size < 175(bp)
INFO: number of enriched regions after final processing 2878 [total length = 693598 (bp), fraction of region length = 0.013519] with fraction of all sequences found in enriched regions = 0.087884

INFO: profiling region >>> GL000198.1:1-90085
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000198.1:1-90085
. 342 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000198.1:1-90085
. 1544 fragments are accepted.
WARNING: no significant bins (FDR=0.05)...
WARNING: no significant bins (FDR=0.05)...
WARNING: no significant bins (FDR=0.05)...
WARNING: no significant bins (FDR=0.05)...
WARNING: ZERO enriched reagions are found ...

INFO: profiling region >>> GL000218.1:1-161147
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000218.1:1-161147
. 421 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000218.1:1-161147
. 1341 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000239.1:1-33824
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000239.1:1-33824
. 15 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000239.1:1-33824
. 63 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000192.1:1-547496
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000192.1:1-547496
. 663 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000192.1:1-547496
. 1622 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000194.1:1-191469
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000194.1:1-191469
. 739 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000194.1:1-191469
. 1810 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000196.1:1-38914
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000196.1:1-38914
. 3 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000196.1:1-38914
. 7 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> X:1-155270560
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam X:1-155270560
. 166174 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam X:1-155270560
.. 501373 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000235.1:1-34474
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000235.1:1-34474
. 129 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000235.1:1-34474
. 399 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000212.1:1-186858
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000212.1:1-186858
. 702 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000212.1:1-186858
. 2166 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> Y:1-59373566
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam Y:1-59373566
. 18923 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam Y:1-59373566
. 65891 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000210.1:1-27682
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000210.1:1-27682
. 10 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000210.1:1-27682
. 31 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000237.1:1-45867
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000237.1:1-45867
. 133 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000237.1:1-45867
. 549 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000231.1:1-27386
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000231.1:1-27386
. 143 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000231.1:1-27386
. 602 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000216.1:1-172294
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000216.1:1-172294
. 1865 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000216.1:1-172294
. 5769 fragments are accepted.
WARNING: no significant bins (FDR=0.05)...
WARNING: no significant bins (FDR=0.05)...
WARNING: no significant bins (FDR=0.05)...
WARNING: no significant bins (FDR=0.05)...
WARNING: ZERO enriched reagions are found ...

INFO: profiling region >>> GL000233.1:1-45941
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000233.1:1-45941
. 24 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000233.1:1-45941
. 118 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000214.1:1-137718
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000214.1:1-137718
. 1494 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000214.1:1-137718
. 4272 fragments are accepted.
WARNING: no significant bins (FDR=0.05)...
WARNING: no significant bins (FDR=0.05)...
WARNING: no significant bins (FDR=0.05)...
WARNING: no significant bins (FDR=0.05)...
WARNING: ZERO enriched reagions are found ...

INFO: profiling region >>> GL000208.1:1-92689
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000208.1:1-92689
. 408 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000208.1:1-92689
. 2152 fragments are accepted.
WARNING: no significant bins (FDR=0.05)...

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000229.1:1-19913
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000229.1:1-19913
. 113 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000229.1:1-19913
. 464 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000206.1:1-41001
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000206.1:1-41001
. 27 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000206.1:1-41001
. 35 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000240.1:1-41933
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000240.1:1-41933
. 38 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000240.1:1-41933
. 148 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000246.1:1-38154
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000246.1:1-38154
. 29 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000246.1:1-38154
. 50 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000223.1:1-180455
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000223.1:1-180455
. 13 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000223.1:1-180455
. 27 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000200.1:1-187035
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000200.1:1-187035
 0 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000200.1:1-187035
 0 fragments are accepted.

INFO: profiling region >>> GL000248.1:1-39786
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000248.1:1-39786
. 14 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000248.1:1-39786
. 15 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000221.1:1-155397
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000221.1:1-155397
. 94 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000221.1:1-155397
. 368 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000242.1:1-43523
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000242.1:1-43523
. 2 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000242.1:1-43523
. 13 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000204.1:1-81310
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000204.1:1-81310
. 309 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000204.1:1-81310
. 490 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000227.1:1-128374
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000227.1:1-128374
. 21 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000227.1:1-128374
. 61 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000244.1:1-39929
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000244.1:1-39929
. 8 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000244.1:1-39929
. 12 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000202.1:1-40103
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000202.1:1-40103
. 93 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000202.1:1-40103
. 193 fragments are accepted.

WARNING: no bkg locations were found for this analysis region. Skipping ...

INFO: profiling region >>> GL000225.1:1-211173
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77362/A77362.CBTEAANXX_2.bam GL000225.1:1-211173
. 3258 fragments are accepted.
INFO: generating coverage profile for /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam INFO: running command >> /home/pubseq/BioSw/samtools/samtools-0.1.16/samtools view -X -q 5 -f 0 -F 1028 /projects/bioqc_dev/ilitests/BQ-861/cPin/IX5776/A77366/A77366.CBTEAANXX_2.bam GL000225.1:1-211173
. 8719 fragments are accepted.
WARNING: no significant bins (FDR=0.05)...
WARNING: no significant bins (FDR=0.05)...
WARNING: no significant bins (FDR=0.05)...
WARNING: no significant bins (FDR=0.05)...
WARNING: ZERO enriched reagions are found ...
INFO: Finished OK