Information for 23-TCGTGTGG (Motif 37)

A G C T A G T C A C T G A C G T A C T G C G A T A C T G A C T G
Reverse Opposite:
A G T C G T A C C G T A G T A C C G T A A G T C A C T G C T G A
p-value:1e-17
log p-value:-4.001e+01
Information Content per bp:1.887
Number of Target Sequences with motif198.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif269.8
Percentage of Background Sequences with motif0.75%
Average Position of motif in Targets98.7 +/- 58.2bp
Average Position of motif in Background106.4 +/- 58.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TCGTGTGG----
NNHTGTGGTTWN
 A G C T A G T C A C T G A C G T A C T G C G A T A C T G A C T G A C G T A C G T A C G T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

PB0044.1_Mtf1_1/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TCGTGTGG-----
GGGCCGTGTGCAAAAA
 A C G T A C G T A C G T A G C T A G T C A C T G A C G T A C T G C G A T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TCGTGTGG---
GTCTGTGGTTT
 A G C T A G T C A C T G A C G T A C T G C G A T A C T G A C T G A C G T A C G T A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TCGTGTGG
VBSYGTCTGG
 A C G T A C G T A G C T A G T C A C T G A C G T A C T G C G A T A C T G A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:TCGTGTGG--
----GTGGAT
 A G C T A G T C A C T G A C G T A C T G C G A T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TCGTGTGG
CTGTCTGG
 A G C T A G T C A C T G A C G T A C T G C G A T A C T G A C T G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCGTGTGG---
-GCTGTGGTTT
 A G C T A G T C A C T G A C G T A C T G C G A T A C T G A C T G A C G T A C G T A C G T
A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TCGTGTGG----
--CTGTGGTTTN
 A G C T A G T C A C T G A C G T A C T G C G A T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

GLI2/MA0734.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCGTGTGG----
CAGTGTGGTCGC
 A G C T A G T C A C T G A C G T A C T G C G A T A C T G A C T G A C G T A C G T A C G T A C G T
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCGTGTGG-
RTCATGTGAC
 A C G T A G C T A G T C A C T G A C G T A C T G C G A T A C T G A C T G A C G T
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C