Running: ../ntEdit.pl [v0.1] -f ecoliWithMismatches001Indels0001.fa.gz -k 25 -d 5 -i 4 -x 5 -y 9 -z 100 -b ntEditEcolik25 -r solidBF_k25.bf ----------------- Verifying files ----------------- Checking sequence target file ecoliWithMismatches001Indels0001.fa.gz...ok A Bloom filter was supplied (solidBF_k25.bf) Checking Bloom filter file solidBF_k25.bf...ok Loading bloom filter from solidBF_k25.bf =>Reading sequence contigs (to edit), tracking k-mer positions : Fri Nov 30 14:30:41 PST 2018 Contigs (>= 100 bp) processed k=25: 1 =>Process completed : Fri Nov 30 14:30:59 PST 2018 The new draft is: ntEditEcolik25_edited.fa with accompanying changes: ntEditEcolik25_changes.tsv ../ntEdit.pl executed normally Fri Nov 30 14:30:59 PST 2018 ../ntEdit.pl [v0.1] terminated successfully on Fri Nov 30 14:30:59 PST 2018