Sample Chromosome Start End Num_Probes Segment_Mean TCGA-AB-3009 1 61735 86341 15 -0.683 TCGA-AB-3009 1 98588 3166089 717 0.3069 TCGA-AB-3009 1 3169157 9308037 3956 0.0039 TCGA-AB-3009 1 9315847 9404980 60 0.2934 TCGA-AB-3009 1 9406979 12845863 1777 0.0104 TCGA-AB-3009 1 12852748 13717824 87 0.2547 TCGA-AB-3009 1 13724101 16013985 1725 0.0039 TCGA-AB-3009 1 16015319 16087824 27 0.4073 TCGA-AB-3009 1 16087996 17235698 480 0.0326 TCGA-AB-3009 1 17235852 17324445 66 0.3422 TCGA-AB-3009 1 17325955 17599942 223 0.0092 TCGA-AB-3009 1 17600317 17610913 7 0.6975 TCGA-AB-3009 1 17611288 21688903 2738 0.0059 TCGA-AB-3009 1 21691897 21722271 18 0.4666 TCGA-AB-3009 1 21723129 22152194 251 0.0031 TCGA-AB-3009 1 22160111 22160257 2 -1.5736 TCGA-AB-3009 1 22164164 22297426 79 0.0459 TCGA-AB-3009 1 22298285 22368208 32 0.4727 TCGA-AB-3009 1 22371404 25453295 1813 0.0047 TCGA-AB-3009 1 25455525 25455535 2 2.0904 TCGA-AB-3009 1 25455892 25583341 86 0.0113 TCGA-AB-3009 1 25593128 25646689 25 -1.7895 TCGA-AB-3009 1 25646744 31139580 2746 0.009 TCGA-AB-3009 1 31139947 31262005 85 0.2876 TCGA-AB-3009 1 31262837 32894381 769 0.0169 TCGA-AB-3009 1 32896119 32900848 2 1.2134 TCGA-AB-3009 1 32901240 35088484 1366 -0.003 TCGA-AB-3009 1 35091458 35117925 28 0.3763 TCGA-AB-3009 1 35118031 37774697 1415 -0.0109 TCGA-AB-3009 1 37776298 37779966 3 1.1727 TCGA-AB-3009 1 37780362 37892154 74 -0.0322 TCGA-AB-3009 1 37892550 37921043 12 0.519 TCGA-AB-3009 1 37923399 39132432 688 0.007 TCGA-AB-3009 1 39132433 39135250 4 -1.0914 TCGA-AB-3009 1 39135266 40097518 499 0.0169 TCGA-AB-3009 1 40104461 40153748 27 0.3548 TCGA-AB-3009 1 40154634 48841815 5019 -0.0034 TCGA-AB-3009 1 48844612 48863365 10 0.5825 TCGA-AB-3009 1 48863987 71312920 15223 0.0016 TCGA-AB-3009 1 71314224 71340070 18 -1.1295 TCGA-AB-3009 1 71349408 72768916 854 0.0045 TCGA-AB-3009 1 72768936 72811148 45 -1.6458 TCGA-AB-3009 1 72811904 94978199 14277 0.0044 TCGA-AB-3009 1 94979573 95002211 17 -0.9862 TCGA-AB-3009 1 95005105 148870937 17775 -0.0059 TCGA-AB-3009 1 148893345 149521846 181 0.6989 TCGA-AB-3009 1 149545372 152555527 1496 0.0164 TCGA-AB-3009 1 152555706 152586594 35 0.4155 TCGA-AB-3009 1 152590494 174795938 15073 0.0035 TCGA-AB-3009 1 174796266 174803773 33 0.4244 TCGA-AB-3009 1 174804979 175486847 467 0.0067 TCGA-AB-3009 1 175486921 175488501 3 -1.575 TCGA-AB-3009 1 175489023 196732086 14169 -0.0058 TCGA-AB-3009 1 196738623 196758159 35 -0.7638 TCGA-AB-3009 1 196759274 196791043 31 0.0516 TCGA-AB-3009 1 196798565 196828938 37 -0.6298 TCGA-AB-3009 1 196831324 199111363 1368 -0.0023 TCGA-AB-3009 1 199111426 199113840 8 -0.9726 TCGA-AB-3009 1 199114238 212999819 9375 0.0032 TCGA-AB-3009 1 213004455 213006397 7 -0.9595 TCGA-AB-3009 1 213010436 243048740 21305 0.0021 TCGA-AB-3009 1 243049874 243059774 38 0.6142 TCGA-AB-3009 1 243062601 249224388 3808 0.0037 TCGA-AB-3009 2 12784 99260 41 0.4596 TCGA-AB-3009 2 99911 18178394 13519 0.0039 TCGA-AB-3009 2 18179128 18180103 5 -0.9905 TCGA-AB-3009 2 18180370 33058768 9257 0.007 TCGA-AB-3009 2 33059096 33101818 28 0.4357 TCGA-AB-3009 2 33101908 34646409 1233 0.0112 TCGA-AB-3009 2 34648698 34737057 63 -0.452 TCGA-AB-3009 2 34737163 36533822 1349 -0.0213 TCGA-AB-3009 2 36534484 36535343 2 1.7862 TCGA-AB-3009 2 36541348 41238127 3470 0.0142 TCGA-AB-3009 2 41238139 41251278 29 -0.7251 TCGA-AB-3009 2 41251724 52754881 8191 -0.0139 TCGA-AB-3009 2 52758753 52781326 26 -0.7172 TCGA-AB-3009 2 52781374 68088168 10102 0.0059 TCGA-AB-3009 2 68088399 68163903 43 0.4914 TCGA-AB-3009 2 68165637 98118212 13941 -0.0095 TCGA-AB-3009 2 98140747 98187302 18 -0.6909 TCGA-AB-3009 2 98190149 106874722 5564 1e-04 TCGA-AB-3009 2 106880095 106887408 14 0.8089 TCGA-AB-3009 2 106887870 108507437 999 -0.0316 TCGA-AB-3009 2 108508052 108520376 2 1.6001 TCGA-AB-3009 2 108526039 110477250 1112 0.0126 TCGA-AB-3009 2 110501512 110955643 69 0.2523 TCGA-AB-3009 2 110960226 114324438 1656 0.0031 TCGA-AB-3009 2 114324463 114383552 9 0.6396 TCGA-AB-3009 2 114384353 117579576 1940 -0.0184 TCGA-AB-3009 2 117585649 117672004 43 -0.3013 TCGA-AB-3009 2 117673834 123479951 3720 0.0011 TCGA-AB-3009 2 123481713 123482241 7 -1.2414 TCGA-AB-3009 2 123483653 126442223 1946 -0.034 TCGA-AB-3009 2 126451651 126451913 2 -2.754 TCGA-AB-3009 2 126451932 130817339 2835 0.0069 TCGA-AB-3009 2 130817360 130826342 8 0.8459 TCGA-AB-3009 2 130849237 146866266 9603 0.0054 TCGA-AB-3009 2 146866393 146878475 13 -0.6947 TCGA-AB-3009 2 146878532 163821333 10095 2e-04 TCGA-AB-3009 2 163826339 163839108 19 -0.4524 TCGA-AB-3009 2 163848347 180419753 10397 0.0063 TCGA-AB-3009 2 180420443 180421497 10 -1.0041 TCGA-AB-3009 2 180421512 211607852 18424 -0.0024 TCGA-AB-3009 2 211608583 211610923 3 -1.2672 TCGA-AB-3009 2 211611355 232369401 13519 -0.0019 TCGA-AB-3009 2 232375230 232389301 10 0.7414 TCGA-AB-3009 2 232392969 233294239 469 0.0373 TCGA-AB-3009 2 233302835 233318078 6 0.8368 TCGA-AB-3009 2 233318732 233630787 180 -0.0143 TCGA-AB-3009 2 233636450 233645568 7 -0.7748 TCGA-AB-3009 2 233648154 235922791 1630 -0.0018 TCGA-AB-3009 2 235922973 235950187 21 0.5578 TCGA-AB-3009 2 235953565 240328213 2871 0.006 TCGA-AB-3009 2 240329646 240333093 2 1.2644 TCGA-AB-3009 2 240337482 241677264 869 0.0184 TCGA-AB-3009 2 241684692 241735604 18 0.5855 TCGA-AB-3009 2 241735660 243089456 588 0.0712 TCGA-AB-3009 3 60345 10192929 8632 -0.0132 TCGA-AB-3009 3 10192948 10287360 84 0.3419 TCGA-AB-3009 3 10288106 13607746 2463 0.0193 TCGA-AB-3009 3 13608162 13621911 12 0.5747 TCGA-AB-3009 3 13624899 21259018 4718 0.0025 TCGA-AB-3009 3 21259194 21260370 4 -1.3484 TCGA-AB-3009 3 21261025 22078168 731 -0.0444 TCGA-AB-3009 3 22080291 22084316 8 -1.1519 TCGA-AB-3009 3 22084531 22175935 92 -0.0599 TCGA-AB-3009 3 22181173 22181182 2 1.8103 TCGA-AB-3009 3 22181446 26378257 3150 0.0033 TCGA-AB-3009 3 26384844 26385709 2 -1.6135 TCGA-AB-3009 3 26386765 29433099 2079 0.006 TCGA-AB-3009 3 29437405 29438408 4 -1.1662 TCGA-AB-3009 3 29438500 46793377 11257 0.0055 TCGA-AB-3009 3 46801817 46849179 39 -1.1191 TCGA-AB-3009 3 46849589 53023211 2496 -9e-04 TCGA-AB-3009 3 53028375 53032038 13 0.5607 TCGA-AB-3009 3 53033148 59945727 4831 0.0048 TCGA-AB-3009 3 59946384 59946469 2 -1.7828 TCGA-AB-3009 3 59946710 60775460 975 -0.0047 TCGA-AB-3009 3 60777932 60781027 5 -1.276 TCGA-AB-3009 3 60784223 61606237 697 0.0161 TCGA-AB-3009 3 61612245 61615972 8 0.7182 TCGA-AB-3009 3 61615985 65199568 3090 -0.0015 TCGA-AB-3009 3 65199702 65216830 31 0.4056 TCGA-AB-3009 3 65217656 75449614 7311 0.0012 TCGA-AB-3009 3 75449833 75620895 67 0.446 TCGA-AB-3009 3 75638741 85452964 5448 -0.0125 TCGA-AB-3009 3 85457798 85577197 67 -0.366 TCGA-AB-3009 3 85577233 129786739 24263 1e-04 TCGA-AB-3009 3 129786753 129806236 42 -1.4758 TCGA-AB-3009 3 129806924 131706696 1173 0.0159 TCGA-AB-3009 3 131708157 131708471 2 -2.6091 TCGA-AB-3009 3 131714999 137033060 3333 0.011 TCGA-AB-3009 3 137033260 137033433 11 0.8876 TCGA-AB-3009 3 137041493 146376541 5880 -0.0026 TCGA-AB-3009 3 146378529 146450372 42 -0.375 TCGA-AB-3009 3 146461800 150522700 2417 -0.0143 TCGA-AB-3009 3 150523205 150562783 25 0.4217 TCGA-AB-3009 3 150563695 162490482 7383 0.0022 TCGA-AB-3009 3 162490957 162521623 31 -0.4082 TCGA-AB-3009 3 162524858 176694888 8759 -0.0213 TCGA-AB-3009 3 176694957 176708655 24 0.4219 TCGA-AB-3009 3 176708781 178121200 810 -0.0027 TCGA-AB-3009 3 178122321 178126597 3 -1.9107 TCGA-AB-3009 3 178128635 178887634 506 -0.0084 TCGA-AB-3009 3 178887923 178888165 7 -1.3039 TCGA-AB-3009 3 178892224 183280319 2524 0.0032 TCGA-AB-3009 3 183291162 183295294 5 1.0794 TCGA-AB-3009 3 183296543 186386425 1837 0.0265 TCGA-AB-3009 3 186386559 186415534 43 -0.9774 TCGA-AB-3009 3 186416009 192873704 4726 -0.0153 TCGA-AB-3009 3 192873807 192882903 22 1.5206 TCGA-AB-3009 3 192886435 197848644 2694 0.0244 TCGA-AB-3009 3 197848659 197896118 12 0.7416 TCGA-AB-3009 4 12281 46834 38 0.434 TCGA-AB-3009 4 47099 65978 19 -0.0964 TCGA-AB-3009 4 66719 74983 11 0.6267 TCGA-AB-3009 4 75023 3879618 1574 0.0409 TCGA-AB-3009 4 3885808 4166518 73 0.2879 TCGA-AB-3009 4 4166983 7431468 2595 0.0189 TCGA-AB-3009 4 7432402 7466466 36 0.4249 TCGA-AB-3009 4 7466980 8705387 827 0.0217 TCGA-AB-3009 4 8705504 9390930 29 0.3278 TCGA-AB-3009 4 9391271 9397485 9 -0.3965 TCGA-AB-3009 4 9401132 9456977 36 0.291 TCGA-AB-3009 4 9461230 9478849 6 1.8156 TCGA-AB-3009 4 9479035 29855358 14646 -1e-04 TCGA-AB-3009 4 29857785 29858696 4 -2.0315 TCGA-AB-3009 4 29860287 32466129 1618 -0.0142 TCGA-AB-3009 4 32467188 32517954 32 -0.3714 TCGA-AB-3009 4 32518085 34765183 1254 -0.0146 TCGA-AB-3009 4 34765595 34841295 60 -0.3945 TCGA-AB-3009 4 34841364 36011393 761 -0.0018 TCGA-AB-3009 4 36011629 36012853 2 -2.0779 TCGA-AB-3009 4 36013141 40704011 3112 0.0082 TCGA-AB-3009 4 40704145 40704192 2 -2.4063 TCGA-AB-3009 4 40704687 49088640 5070 -0.0133 TCGA-AB-3009 4 49089359 49650106 38 0.3715 TCGA-AB-3009 4 49655363 60630470 5269 0.0066 TCGA-AB-3009 4 60630547 60630730 2 -1.7831 TCGA-AB-3009 4 60630767 61348950 428 0.0057 TCGA-AB-3009 4 61349646 61352182 3 -0.8607 TCGA-AB-3009 4 61352529 61936938 375 0.0057 TCGA-AB-3009 4 61940935 61950836 7 -1.1861 TCGA-AB-3009 4 61950865 63667834 934 0.0012 TCGA-AB-3009 4 63669936 63671662 8 -1.7285 TCGA-AB-3009 4 63679630 69338564 3459 -0.0057 TCGA-AB-3009 4 69344612 69536788 76 0.4725 TCGA-AB-3009 4 69537152 70123510 321 -0.1009 TCGA-AB-3009 4 70127644 70229434 53 -0.685 TCGA-AB-3009 4 70231799 77783901 4605 -0.0021 TCGA-AB-3009 4 77783954 77784690 8 -0.7706 TCGA-AB-3009 4 77784814 96245748 11326 0.0069 TCGA-AB-3009 4 96246506 96247596 15 -1.1312 TCGA-AB-3009 4 96248616 103328547 4261 0.0017 TCGA-AB-3009 4 103328943 103329490 2 -1.6203 TCGA-AB-3009 4 103332894 115173700 7135 -1e-04 TCGA-AB-3009 4 115175323 115182175 23 0.9694 TCGA-AB-3009 4 115184229 137938715 13141 -0.0102 TCGA-AB-3009 4 137938807 137939504 9 -0.8083 TCGA-AB-3009 4 137939776 138108363 128 -0.0355 TCGA-AB-3009 4 138108487 138126941 14 -0.6586 TCGA-AB-3009 4 138127817 141249662 2172 -0.0055 TCGA-AB-3009 4 141250035 141275616 18 0.3268 TCGA-AB-3009 4 141276725 141281628 7 0.6221 TCGA-AB-3009 4 141284486 141299074 6 0.3322 TCGA-AB-3009 4 141304557 143705673 1539 0.0066 TCGA-AB-3009 4 143706952 143721371 7 -0.6193 TCGA-AB-3009 4 143722368 143793797 46 0.0021 TCGA-AB-3009 4 143793939 143794549 7 -0.8764 TCGA-AB-3009 4 143794766 161062935 10333 0.0041 TCGA-AB-3009 4 161062969 161067027 10 -0.7611 TCGA-AB-3009 4 161067090 161874000 606 -0.0074 TCGA-AB-3009 4 161880018 161884908 21 -0.9675 TCGA-AB-3009 4 161884919 168821502 4370 -0.0045 TCGA-AB-3009 4 168821570 168827950 17 -0.5949 TCGA-AB-3009 4 168828108 178890373 6262 9e-04 TCGA-AB-3009 4 178890407 178895907 12 -0.6324 TCGA-AB-3009 4 178896199 183954060 3840 -0.0137 TCGA-AB-3009 4 183954957 184029396 34 -0.3351 TCGA-AB-3009 4 184030863 186003688 1309 0.0482 TCGA-AB-3009 4 186004386 186004540 3 -1.3015 TCGA-AB-3009 4 186008402 190189043 2972 -0.0189 TCGA-AB-3009 4 190195118 190199264 4 -3.111 TCGA-AB-3009 4 190199771 191027923 386 0.0205 TCGA-AB-3009 5 15532 15719350 12212 0.0099 TCGA-AB-3009 5 15720075 15720478 8 -1.2034 TCGA-AB-3009 5 15720597 18924013 2050 -0.0269 TCGA-AB-3009 5 18924160 18955959 15 -0.818 TCGA-AB-3009 5 18958747 21449276 1487 -0.0378 TCGA-AB-3009 5 21451200 21452496 6 1.0816 TCGA-AB-3009 5 21454939 34147112 7933 -0.0124 TCGA-AB-3009 5 34147430 34229206 25 0.6263 TCGA-AB-3009 5 34229237 44265078 6260 9e-04 TCGA-AB-3009 5 44265089 44266991 2 -1.8604 TCGA-AB-3009 5 44268987 46271108 795 -0.0228 TCGA-AB-3009 5 46271930 46273502 6 -3.909 TCGA-AB-3009 5 46278212 57321646 5079 0.001 TCGA-AB-3009 5 57326027 57333533 32 1.8027 TCGA-AB-3009 5 57338357 98624358 23820 0.0014 TCGA-AB-3009 5 98625270 98644443 11 -0.6047 TCGA-AB-3009 5 98645068 98736773 60 -0.0123 TCGA-AB-3009 5 98753247 98759032 6 -1.4616 TCGA-AB-3009 5 98767744 101012118 1304 -0.0627 TCGA-AB-3009 5 101014287 101096488 54 0.4149 TCGA-AB-3009 5 101096584 101463189 278 -0.0383 TCGA-AB-3009 5 101464844 101465106 2 -1.4653 TCGA-AB-3009 5 101473187 103851221 1319 -0.0071 TCGA-AB-3009 5 103860373 103860548 3 -2.9503 TCGA-AB-3009 5 103860604 120398521 11363 -0.0022 TCGA-AB-3009 5 120399136 120432698 16 -0.7129 TCGA-AB-3009 5 120432884 171453152 33222 0.0048 TCGA-AB-3009 5 171456455 171590679 113 0.2636 TCGA-AB-3009 5 171593267 176055506 3100 0.0088 TCGA-AB-3009 5 176058228 176309171 128 0.3517 TCGA-AB-3009 5 176309854 179085185 1423 0.029 TCGA-AB-3009 5 179085205 179104133 24 0.5543 TCGA-AB-3009 5 179104532 180790320 915 0.0253 TCGA-AB-3009 6 149661 807008 556 0.0584 TCGA-AB-3009 6 808660 867007 50 0.4987 TCGA-AB-3009 6 867030 19040119 14190 0.0061 TCGA-AB-3009 6 19042181 19042818 3 -1.8798 TCGA-AB-3009 6 19044702 25450486 4664 0.015 TCGA-AB-3009 6 25455297 25485722 19 0.4601 TCGA-AB-3009 6 25486154 26704972 786 0 TCGA-AB-3009 6 26705106 26783667 35 -0.5099 TCGA-AB-3009 6 26798155 29837188 1436 0.0038 TCGA-AB-3009 6 29837314 29850380 18 -0.9529 TCGA-AB-3009 6 29871636 31286305 671 0.0806 TCGA-AB-3009 6 31286531 31296451 9 1.2798 TCGA-AB-3009 6 31309924 32431292 501 0.1718 TCGA-AB-3009 6 32431552 32570365 37 1.5143 TCGA-AB-3009 6 32573771 32690027 80 0.3067 TCGA-AB-3009 6 32690797 32690830 3 1.6388 TCGA-AB-3009 6 32692227 65333073 18046 9e-04 TCGA-AB-3009 6 65334050 65336942 6 0.3694 TCGA-AB-3009 6 65347544 65348992 2 -3.8885 TCGA-AB-3009 6 65350776 78962293 8933 -0.0119 TCGA-AB-3009 6 78962581 79035185 117 -0.6985 TCGA-AB-3009 6 79039234 92005578 8200 -0.0011 TCGA-AB-3009 6 92008916 92061840 48 -0.2941 TCGA-AB-3009 6 92062695 92762453 464 -0.0112 TCGA-AB-3009 6 92763966 92765000 3 -1.3104 TCGA-AB-3009 6 92766359 103734645 6765 -0.0241 TCGA-AB-3009 6 103734803 103762061 50 0.6253 TCGA-AB-3009 6 103765470 134266268 19086 -0.0031 TCGA-AB-3009 6 134269071 134269632 2 -2.8114 TCGA-AB-3009 6 134272072 156487398 15004 0.0038 TCGA-AB-3009 6 156488698 156520101 30 0.3684 TCGA-AB-3009 6 156520159 157779495 685 -0.0113 TCGA-AB-3009 6 157781264 157829617 8 0.9251 TCGA-AB-3009 6 157835571 162496847 3335 0.003 TCGA-AB-3009 6 162497492 162497976 6 -0.789 TCGA-AB-3009 6 162497989 162779001 227 -0.0392 TCGA-AB-3009 6 162782861 163052052 224 -1.172 TCGA-AB-3009 6 163053610 170363580 5296 0.0158 TCGA-AB-3009 6 170364300 170547624 82 0.3425 TCGA-AB-3009 6 170547955 171051005 242 0.0141 TCGA-AB-3009 7 43355 133775462 82132 0.0041 TCGA-AB-3009 7 133778429 133785211 8 0.6453 TCGA-AB-3009 7 133785309 133785796 10 1.1219 TCGA-AB-3009 7 133785899 133799197 25 0.4538 TCGA-AB-3009 7 133806244 141787130 5224 0.0139 TCGA-AB-3009 7 141787241 141882455 77 0.2741 TCGA-AB-3009 7 141882638 141951998 62 -0.0113 TCGA-AB-3009 7 141952110 141959449 5 -0.8818 TCGA-AB-3009 7 141959809 142474653 320 0.1494 TCGA-AB-3009 7 142474939 142488688 33 0.916 TCGA-AB-3009 7 142490900 143909445 837 0.0225 TCGA-AB-3009 7 143911624 144066947 39 -0.7053 TCGA-AB-3009 7 144074929 147660612 2362 0 TCGA-AB-3009 7 147660659 147662560 2 -2.4878 TCGA-AB-3009 7 147662579 147713980 42 -0.0209 TCGA-AB-3009 7 147713993 147715896 5 -0.9461 TCGA-AB-3009 7 147716165 149561049 1078 0.0065 TCGA-AB-3009 7 149563894 149743104 80 0.2781 TCGA-AB-3009 7 149747872 154389895 2880 0.0193 TCGA-AB-3009 7 154393171 154399613 4 -2.8595 TCGA-AB-3009 7 154400830 159058062 3179 0.0269 TCGA-AB-3009 7 159059402 159127004 63 0.4401 TCGA-AB-3009 8 31254 593041 327 0.0837 TCGA-AB-3009 8 594944 595908 10 2.5212 TCGA-AB-3009 8 601043 7394684 7578 0.0062 TCGA-AB-3009 8 7397885 8102525 159 0.3074 TCGA-AB-3009 8 8102831 12216009 3236 0.0413 TCGA-AB-3009 8 12216848 12234298 8 -1.6977 TCGA-AB-3009 8 12234400 12241813 12 -0.252 TCGA-AB-3009 8 12241976 12558929 115 0.3721 TCGA-AB-3009 8 12559835 12646389 66 -0.0036 TCGA-AB-3009 8 12648728 12649178 2 -2.5028 TCGA-AB-3009 8 12652105 16010179 3234 -0.0308 TCGA-AB-3009 8 16010732 16010949 2 -1.6841 TCGA-AB-3009 8 16012193 24974522 7086 0.0045 TCGA-AB-3009 8 24974577 24978537 9 -0.8789 TCGA-AB-3009 8 24979285 38286300 8542 -0.0028 TCGA-AB-3009 8 38286352 38290509 6 1.0046 TCGA-AB-3009 8 38291087 39230659 508 0.0135 TCGA-AB-3009 8 39235603 39386965 59 -2.7436 TCGA-AB-3009 8 39388299 40181978 587 0.0106 TCGA-AB-3009 8 40181997 40183944 6 0.7663 TCGA-AB-3009 8 40184148 59315545 9509 0.0057 TCGA-AB-3009 8 59315957 59319187 7 -0.9632 TCGA-AB-3009 8 59319398 115563823 33724 -0.0028 TCGA-AB-3009 8 115565513 115641731 79 -0.4744 TCGA-AB-3009 8 115650697 121812077 4181 -0.0019 TCGA-AB-3009 8 121814813 121815232 3 -1.4032 TCGA-AB-3009 8 121818123 129756266 5622 0.0055 TCGA-AB-3009 8 129763135 129764085 2 -3.759 TCGA-AB-3009 8 129777454 137840692 6216 0.0089 TCGA-AB-3009 8 137840725 137841087 5 -1.1354 TCGA-AB-3009 8 137841356 144284479 4381 0.0495 TCGA-AB-3009 8 144290410 144310383 15 0.7589 TCGA-AB-3009 8 144310437 144698669 118 -0.0123 TCGA-AB-3009 8 144698815 144727653 17 0.5351 TCGA-AB-3009 8 144728018 145232410 142 0.077 TCGA-AB-3009 8 145232496 145760746 112 0.3976 TCGA-AB-3009 8 145764544 146237167 216 0.0757 TCGA-AB-3009 8 146239140 146298155 30 0.5997 TCGA-AB-3009 9 46587 38805380 31181 -0.0091 TCGA-AB-3009 9 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93 0.0223 TCGA-AB-3009 11 3586829 3672313 49 0.3116 TCGA-AB-3009 11 3672751 4232135 359 0.0081 TCGA-AB-3009 11 4232627 4234748 5 -1.1407 TCGA-AB-3009 11 4235775 4737868 453 0.0321 TCGA-AB-3009 11 4738639 4739291 5 -0.9315 TCGA-AB-3009 11 4739539 4970243 234 0.0391 TCGA-AB-3009 11 4970277 4973863 20 -0.4486 TCGA-AB-3009 11 4973878 5208393 213 0.0096 TCGA-AB-3009 11 5208499 5209370 2 -1.7328 TCGA-AB-3009 11 5209592 6029788 809 0.0045 TCGA-AB-3009 11 6030224 6037455 8 0.6513 TCGA-AB-3009 11 6047926 6107790 46 0.0082 TCGA-AB-3009 11 6108269 6120647 7 0.7155 TCGA-AB-3009 11 6122094 6945451 603 -0.0031 TCGA-AB-3009 11 6947761 6948775 4 1.1486 TCGA-AB-3009 11 6954728 18949072 8563 0.0013 TCGA-AB-3009 11 18949109 18961988 55 0.3406 TCGA-AB-3009 11 18962016 21496432 2330 -0.0094 TCGA-AB-3009 11 21496506 21497779 6 -0.8745 TCGA-AB-3009 11 21502608 21714552 162 -0.0175 TCGA-AB-3009 11 21722962 21722976 2 -1.3166 TCGA-AB-3009 11 21723140 21885768 139 -0.0173 TCGA-AB-3009 11 21887109 21980984 55 0.5818 TCGA-AB-3009 11 21981682 44670789 15824 -0.0116 TCGA-AB-3009 11 44671894 44694675 19 0.5408 TCGA-AB-3009 11 44694840 55376280 3311 0.0082 TCGA-AB-3009 11 55376498 55460683 53 -0.5858 TCGA-AB-3009 11 55460788 55721477 202 -0.1331 TCGA-AB-3009 11 55721679 55726609 8 -0.9786 TCGA-AB-3009 11 55727032 55967326 156 -0.0337 TCGA-AB-3009 11 55967446 56007543 27 -0.4341 TCGA-AB-3009 11 56010199 59008439 1785 0.0033 TCGA-AB-3009 11 59009805 59014969 6 -1.1418 TCGA-AB-3009 11 59019961 67338582 3991 0.0204 TCGA-AB-3009 11 67343421 67770592 141 0.2777 TCGA-AB-3009 11 67770619 90532196 14158 7e-04 TCGA-AB-3009 11 90533877 90538099 4 -1.2502 TCGA-AB-3009 11 90538258 134944770 31928 0.0051 TCGA-AB-3009 12 150442 2251753 1285 0.0868 TCGA-AB-3009 12 2251866 2251881 2 -1.7238 TCGA-AB-3009 12 2252434 3352183 796 0.0184 TCGA-AB-3009 12 3352245 3358345 6 0.7344 TCGA-AB-3009 12 3359069 4385604 796 0.0068 TCGA-AB-3009 12 4385793 4386233 4 1.0323 TCGA-AB-3009 12 4386286 8371320 2672 0.0214 TCGA-AB-3009 12 8372757 8594894 81 0.3504 TCGA-AB-3009 12 8595531 9630556 563 0.0485 TCGA-AB-3009 12 9633870 9734970 27 1.1213 TCGA-AB-3009 12 9735686 11215372 1038 0.0052 TCGA-AB-3009 12 11216849 11251874 15 -1.2815 TCGA-AB-3009 12 11256829 22248674 7447 0.0049 TCGA-AB-3009 12 22248688 22252932 12 0.6947 TCGA-AB-3009 12 22252945 45904438 13766 -0.002 TCGA-AB-3009 12 45905840 45909537 3 -1.6511 TCGA-AB-3009 12 45913292 52236979 3420 1e-04 TCGA-AB-3009 12 52237483 52250346 8 0.7385 TCGA-AB-3009 12 52253441 53426399 961 0.0323 TCGA-AB-3009 12 53432752 53523212 50 0.3763 TCGA-AB-3009 12 53529326 56478362 1595 -0.0088 TCGA-AB-3009 12 56478405 56478409 2 1.729 TCGA-AB-3009 12 56481075 63932963 4619 0.0012 TCGA-AB-3009 12 63939724 64134805 65 -0.8302 TCGA-AB-3009 12 64135427 73351588 6076 0.0029 TCGA-AB-3009 12 73353519 73367887 13 -0.6942 TCGA-AB-3009 12 73371089 74844696 823 -0.02 TCGA-AB-3009 12 74848356 74871595 18 -1.2111 TCGA-AB-3009 12 74874138 99795851 16099 -0.0012 TCGA-AB-3009 12 99796186 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TCGA-AB-3009 13 32540047 58583350 16916 0.011 TCGA-AB-3009 13 58584790 58593272 5 -1.6727 TCGA-AB-3009 13 58593346 64344469 3445 -8e-04 TCGA-AB-3009 13 64345684 64345878 4 -1.3426 TCGA-AB-3009 13 64346190 64899233 330 -0.1447 TCGA-AB-3009 13 64899639 64921846 9 -0.8248 TCGA-AB-3009 13 64924949 72476988 4787 -0.0112 TCGA-AB-3009 13 72477555 72480556 4 -2.0032 TCGA-AB-3009 13 72480605 72804900 281 -0.0025 TCGA-AB-3009 13 72808482 72810336 3 -1.5255 TCGA-AB-3009 13 72813062 75373881 1896 -0.0038 TCGA-AB-3009 13 75374357 75374358 2 -1.8166 TCGA-AB-3009 13 75387765 75677072 155 0.0327 TCGA-AB-3009 13 75678668 75682791 3 1.3789 TCGA-AB-3009 13 75684240 77621530 1467 0.0164 TCGA-AB-3009 13 77624920 77626038 5 -0.8259 TCGA-AB-3009 13 77626209 83774560 3860 0.0232 TCGA-AB-3009 13 83774733 83793656 43 -0.3815 TCGA-AB-3009 13 83793805 106576241 15456 0.014 TCGA-AB-3009 13 106576496 106577329 2 -1.7696 TCGA-AB-3009 13 106578067 111682000 4144 0.0085 TCGA-AB-3009 13 111684010 111720463 36 0.3997 TCGA-AB-3009 13 111723086 113523990 1128 0.0011 TCGA-AB-3009 13 113524192 113736054 120 0.2587 TCGA-AB-3009 13 113736126 114987333 489 0.0013 TCGA-AB-3009 13 114987458 115108397 51 0.3397 TCGA-AB-3009 14 19002124 19402242 26 0.2476 TCGA-AB-3009 14 19416191 19469520 12 -0.3756 TCGA-AB-3009 14 19541714 19689317 10 0.5495 TCGA-AB-3009 14 19693231 19693249 2 2.2053 TCGA-AB-3009 14 19697885 22900920 1936 0.0196 TCGA-AB-3009 14 22913994 22917633 4 -5.8244 TCGA-AB-3009 14 22922238 24478894 955 0.029 TCGA-AB-3009 14 24479387 24489019 13 0.7119 TCGA-AB-3009 14 24489165 46414301 13632 -0.0143 TCGA-AB-3009 14 46418443 46431337 10 -0.8025 TCGA-AB-3009 14 46434585 74001123 17715 0.0011 TCGA-AB-3009 14 74006707 74029915 10 -1.5052 TCGA-AB-3009 14 74030731 85564895 7593 0.0052 TCGA-AB-3009 14 85565026 85565295 6 -1.0503 TCGA-AB-3009 14 85565426 86478122 690 0.0102 TCGA-AB-3009 14 86480699 86490334 18 -0.4751 TCGA-AB-3009 14 86493962 93612663 4545 -0.0019 TCGA-AB-3009 14 93613913 93629854 15 0.5183 TCGA-AB-3009 14 93629959 94109724 216 0.029 TCGA-AB-3009 14 94111977 94127454 7 -0.6064 TCGA-AB-3009 14 94133094 99149723 4014 -0.0062 TCGA-AB-3009 14 99149853 99150358 5 0.8348 TCGA-AB-3009 14 99150798 99375569 206 0.0178 TCGA-AB-3009 14 99376118 99377959 6 -0.9224 TCGA-AB-3009 14 99378936 106342792 3426 0.0109 TCGA-AB-3009 14 106342902 106401518 11 0.6233 TCGA-AB-3009 14 106401676 106460902 25 -0.0482 TCGA-AB-3009 14 106479675 106479941 2 -2.6467 TCGA-AB-3009 14 106482128 106526966 20 -0.257 TCGA-AB-3009 14 106530364 106560737 16 0.6317 TCGA-AB-3009 14 106561441 107217657 373 0.0033 TCGA-AB-3009 14 107217890 107285437 46 0.4248 TCGA-AB-3009 15 20016328 20122607 21 0.0674 TCGA-AB-3009 15 20130141 20143651 7 0.7939 TCGA-AB-3009 15 20152728 20392821 32 -0.1258 TCGA-AB-3009 15 20395529 20578421 37 -0.9185 TCGA-AB-3009 15 20581451 20581562 6 1.3465 TCGA-AB-3009 15 20581564 22587474 317 -0.8284 TCGA-AB-3009 15 22673399 30502086 4693 0.0166 TCGA-AB-3009 15 30502234 30887956 94 -0.4852 TCGA-AB-3009 15 30900878 53784888 14327 0.0027 TCGA-AB-3009 15 53784991 53785279 6 -0.9368 TCGA-AB-3009 15 53790247 56791094 2041 0.0034 TCGA-AB-3009 15 56791175 56792123 14 0.4914 TCGA-AB-3009 15 56800977 57741994 504 0.0252 TCGA-AB-3009 15 57743933 57744390 4 -0.8855 TCGA-AB-3009 15 57744665 61688191 3121 0.0011 TCGA-AB-3009 15 61690100 61697708 11 -1.4347 TCGA-AB-3009 15 61697928 71465451 6243 -0.0037 TCGA-AB-3009 15 71475356 71476193 3 -1.2158 TCGA-AB-3009 15 71476324 76869789 2865 -0.0044 TCGA-AB-3009 15 76869929 76895775 24 0.7464 TCGA-AB-3009 15 76902179 84827482 4615 0.0042 TCGA-AB-3009 15 84828351 85084484 26 0.4851 TCGA-AB-3009 15 85085485 94817719 7339 0.0171 TCGA-AB-3009 15 94819769 94871292 47 0.564 TCGA-AB-3009 15 94871682 102420602 5639 0.0076 TCGA-AB-3009 15 102420807 102469040 11 0.7689 TCGA-AB-3009 16 60777 130853 35 0.735 TCGA-AB-3009 16 138516 1251281 382 0.2326 TCGA-AB-3009 16 1252599 1288530 7 1.1736 TCGA-AB-3009 16 1297392 1527747 47 0.0602 TCGA-AB-3009 16 1529011 1542687 6 1.1059 TCGA-AB-3009 16 1542736 3841671 957 0.0013 TCGA-AB-3009 16 3845705 3904520 40 0.9271 TCGA-AB-3009 16 3905570 19803846 11981 0.0117 TCGA-AB-3009 16 19805021 19805621 2 -1.8997 TCGA-AB-3009 16 19806921 19944363 57 -0.0047 TCGA-AB-3009 16 19945650 19965875 28 -3.2399 TCGA-AB-3009 16 19967362 26132278 3735 0.0016 TCGA-AB-3009 16 26132379 26133103 4 -1.1033 TCGA-AB-3009 16 26133945 27794349 1226 -0.0042 TCGA-AB-3009 16 27795175 27828950 32 0.3544 TCGA-AB-3009 16 27829674 34459709 1990 0.0259 TCGA-AB-3009 16 34466571 34760967 170 0.8429 TCGA-AB-3009 16 34765093 53458017 4580 0.0047 TCGA-AB-3009 16 53469387 53469807 3 -1.5253 TCGA-AB-3009 16 53469929 78371608 16465 -0.0017 TCGA-AB-3009 16 78372440 78383140 15 0.9182 TCGA-AB-3009 16 78384738 81177705 3216 0.0167 TCGA-AB-3009 16 81178002 81211548 48 0.4269 TCGA-AB-3009 16 81212069 85091864 4016 0.0517 TCGA-AB-3009 16 85092396 85092685 4 -0.9554 TCGA-AB-3009 16 85092748 88685041 2724 0.0308 TCGA-AB-3009 16 88686061 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