Python Module Index

s | v

	s
	scripts
	scripts.load_weekly_variants_test_env
	scripts.vardb_aggregate
	scripts.vardb_analyze
	scripts.vardb_load_annotations
	scripts.vardb_load_dim_tables
	scripts.vardb_load_variants
	scripts.vardb_make_loader
	scripts.vardb_rollout_db
	scripts.vardb_update_db
	scripts.vardb_update_db_env
	v
	vardb
	vardb.connections
	vardb.connections.bioapps
	vardb.connections.bioapps_api
	vardb.connections.bioapps_sql
	vardb.connections.connection
	vardb.connections.karen
	vardb.connections.lims
	vardb.connections.vardb_connection
	vardb.connections.vardb_hdfs
	vardb.connections.vardb_loader
	vardb.metadata_wrangling
	vardb.metadata_wrangling.configuration
	vardb.metadata_wrangling.get_bam_cnvs
	vardb.metadata_wrangling.helpers
	vardb.metadata_wrangling.loader_maker
	vardb.metadata_wrangling.locate_metadata_changes
	vardb.metadata_wrangling.metadata_collector
	vardb.metadata_wrangling.oasis
	vardb.metadata_wrangling.oasis.demographics
	vardb.metadata_wrangling.oasis.diagnosis
	vardb.metadata_wrangling.oasis.drug_map
	vardb.metadata_wrangling.oasis.error_code
	vardb.metadata_wrangling.oasis.helpers
	vardb.metadata_wrangling.oasis.oasis
	vardb.metadata_wrangling.oasis.output
	vardb.metadata_wrangling.oasis.preprocess
	vardb.metadata_wrangling.oasis.radiation
	vardb.metadata_wrangling.oasis.treatment
	vardb.queries
	vardb.queries.CNV_overlap
	vardb.queries.experimental_records
	vardb.queries.experimental_records_external
	vardb.tools
	vardb.variant_data_files
	vardb.variant_data_files.cnv
	vardb.variant_data_files.data_classes
	vardb.variant_data_files.expression
	vardb.variant_data_files.maf
	vardb.variant_data_files.variant_data_file
	vardb.variant_data_files.vcf
	vardb.variant_data_files.vcf_tools
	vardb.variant_file_loaders
	vardb.variant_file_loaders.loader
	vardb.variant_file_loaders.sample_metadata