Overview
Package
Class
Use
Tree
Deprecated
Index
Help
PREV LETTER
NEXT LETTER
FRAMES
NO FRAMES
All Classes
A
B
C
D
E
F
G
H
I
J
K
L
M
N
O
P
Q
R
S
T
U
V
W
X
Y
Z
S
s
- Variable in class jml.matlab.utils.
SingularValueDecompositionImpl
s
- Static variable in class jml.optimization.
PrimalDualInteriorPoint
Step length for backtracking line search.
s_k
- Static variable in class jml.optimization.
BoundConstrainedPLBFGS
s_k
- Static variable in class jml.optimization.
LBFGS
s_k
- Static variable in class jml.optimization.
LBFGSOnSimplex
s_k
- Static variable in class jml.optimization.
NonnegativePLBFGS
s_ks
- Static variable in class jml.optimization.
BoundConstrainedPLBFGS
s_ks
- Static variable in class jml.optimization.
LBFGS
s_ks
- Static variable in class jml.optimization.
LBFGSOnSimplex
s_ks
- Static variable in class jml.optimization.
NonnegativePLBFGS
SAMPLE_LAG
- Static variable in class jml.topics.
LdaGibbsSampler
sample lag (if -1 only one sample taken)
sampleFullConditional(int, int)
- Method in class jml.topics.
LdaGibbsSampler
Sample a topic z_i from the full conditional distribution: p(z_i = j | z_-i, w) = (n_-i,j(w_i) + beta)/(n_-i,j(.) + W * beta) * (n_-i,j(d_i) + alpha)/(n_-i,.(d_i) + K * alpha)
sampleLag
- Variable in class jml.options.
LDAOptions
saveDenseMatrix(String, RealMatrix)
- Static method in class jml.data.
Data
Write a dense matrix into a text file.
saveMatrix(String, RealMatrix)
- Static method in class jml.data.
Data
Write a matrix into a text file.
saveModel(String)
- Method in class jml.classification.
AdaBoost
saveModel(String)
- Method in class jml.classification.
Classifier
Save the model for a classifier.
saveModel(String)
- Method in class jml.classification.
LogisticRegressionMCBoundConstrainedPLBFGS
saveModel(String)
- Method in class jml.classification.
LogisticRegressionMCGradientDescent
saveModel(String)
- Method in class jml.classification.
LogisticRegressionMCLBFGS
saveModel(String)
- Method in class jml.classification.
LogisticRegressionMCLBFGS_Ori
saveModel(String)
- Method in class jml.classification.
LogisticRegressionMCNonlinearConjugateGradient
saveModel(String)
- Method in class jml.classification.
LogisticRegressionMCNonnegativePLBFGS
saveModel(String)
- Method in class jml.classification.
MaxEnt
saveModel(String)
- Method in class jml.classification.
MultiClassSVM
saveModel(String)
- Method in class jml.online.classification.
OnlineBinaryClassifier
Save the model for a classifier.
saveModel(String)
- Method in class jml.regression.
LASSO
saveModel(String)
- Method in class jml.regression.
Regression
saveModel(String)
- Method in class jml.sequence.
CRF
Save the model to a file.
saveModel(String)
- Method in class jml.sequence.
HMM
Save this HMM model to a file.
saveModel2(String)
- Method in class jml.classification.
LogisticRegressionMCLBFGS
saveModel2(String)
- Method in class jml.classification.
LogisticRegressionMCNonlinearConjugateGradient
saveSparseMatrix(String, RealMatrix)
- Static method in class jml.data.
Data
Write a sparse matrix into a text file.
saveSVMModel(String)
- Method in class jml.classification.
MultiClassSVM
scalarDivide(double, RealMatrix)
- Static method in class jml.matlab.
Matlab
Calculate element by element division between a scalar and a matrix.
second
- Variable in class jml.matlab.utils.
Pair
serialVersionUID
- Static variable in class jml.classification.
AdaBoost
serialVersionUID
- Static variable in class jml.classification.
Classifier
serialVersionUID
- Static variable in class jml.classification.
LogisticRegressionMCBoundConstrainedPLBFGS
serialVersionUID
- Static variable in class jml.classification.
LogisticRegressionMCGradientDescent
serialVersionUID
- Static variable in class jml.classification.
LogisticRegressionMCLBFGS
serialVersionUID
- Static variable in class jml.classification.
LogisticRegressionMCLBFGS_Ori
serialVersionUID
- Static variable in class jml.classification.
LogisticRegressionMCNonlinearConjugateGradient
serialVersionUID
- Static variable in class jml.classification.
LogisticRegressionMCNonnegativePLBFGS
serialVersionUID
- Static variable in class jml.classification.
MaxEnt
serialVersionUID
- Static variable in class jml.classification.
MaxEntModel
serialVersionUID
- Static variable in class jml.classification.
Model
serialVersionUID
- Static variable in class jml.classification.
MultiClassSVM
serialVersionUID
- Static variable in class jml.sequence.
CRFModel
serialVersionUID
- Static variable in class jml.sequence.
HMMModel
setA(double[][])
- Method in class jml.sequence.
HMM
setB(double[][])
- Method in class jml.sequence.
HMM
setFirst(A)
- Method in class jml.matlab.utils.
Pair
setK(int)
- Method in class jml.graph.cut.
GraphCut
Set the number of clusters.
setLDATermIndexStart(int)
- Static method in class jml.topics.
Corpus
Set term staring index for LDA input file.
setMatrix(RealMatrix, RealMatrix)
- Static method in class jml.matlab.
Matlab
Set all the elements of X to be those of Y, this is particularly useful when we want to change elements of the object referred by X rather than the reference X itself.
setOs(int[][])
- Method in class jml.sequence.
HMM
setPi(double[])
- Method in class jml.sequence.
HMM
setQs(int[][])
- Method in class jml.sequence.
HMM
setReducedDimensionality(int)
- Method in class jml.subspace.
DimensionalityReduction
setSecond(B)
- Method in class jml.matlab.utils.
Pair
setSubMatrix(RealMatrix, int[], int[], RealMatrix)
- Static method in class jml.matlab.
Matlab
Set submatrix of A with selected rows and selected columns by elements of B.
shadeDouble(double, double)
- Static method in class jml.topics.
LdaGibbsSampler
create a string representation whose gray value appears as an indicator of magnitude, cf.
shades
- Static variable in class jml.topics.
LdaGibbsSampler
shellClassification(String[], String)
- Static method in class jml.
JML
shellClustering(String[], String)
- Static method in class jml.
JML
showObservationSequence(int[])
- Method in class jml.sequence.
HMM
Show an observation sequence.
showStateSequence(int[])
- Method in class jml.sequence.
HMM
Show a state sequence.
showUsage()
- Static method in class jml.classification.
MultiClassSVM
Show usage.
showUsage()
- Static method in class jml.
JML
Show usage.
shrinkage(RealMatrix, double)
- Static method in class jml.optimization.
ShrinkageOperator
Soft-thresholding (shrinkage) operator, which is defined as S_{t}[x] = argmin_u 1/2 * || u - x ||^2 + t||x||_1 which is actually prox_{t||.||_1}(x).
ShrinkageOperator
- Class in
jml.optimization
Soft-thresholding (shrinkage) operator, which is defined as S_{t}[x] = argmin_u 1/2 * || u - x ||^2 + t||x||_1 which is actually prox_{t||.||_1}(x).
ShrinkageOperator()
- Constructor for class jml.optimization.
ShrinkageOperator
sigma
- Variable in class jml.sequence.
CRF
Regularization parameter
sigmoid(RealMatrix)
- Static method in class jml.matlab.
Matlab
Calculate the sigmoid of a matrix A by rows.
sign(RealMatrix)
- Static method in class jml.matlab.
Matlab
Signum function.
SingularValueDecompositionImpl
- Class in
jml.matlab.utils
Calculates the compact Singular Value Decomposition of a matrix.
SingularValueDecompositionImpl(RealMatrix)
- Constructor for class jml.matlab.utils.
SingularValueDecompositionImpl
Calculates the compact Singular Value Decomposition of the given matrix.
SingularValueDecompositionImpl.Solver
- Class in
jml.matlab.utils
Specialized solver.
SingularValueDecompositionImpl.Solver(double[], RealMatrix, RealMatrix, boolean)
- Constructor for class jml.matlab.utils.
SingularValueDecompositionImpl.Solver
Build a solver from decomposed matrix.
size(RealMatrix)
- Static method in class jml.matlab.
Matlab
Get a two dimensional integer array for size of a matrix A.
size(RealMatrix, int)
- Static method in class jml.matlab.
Matlab
Get the dimensionality on dim-th dimension for a matrix A.
solve(double[])
- Method in class jml.matlab.utils.
SingularValueDecompositionImpl.Solver
Solve the linear equation A × X = B in least square sense.
solve(RealVector)
- Method in class jml.matlab.utils.
SingularValueDecompositionImpl.Solver
Solve the linear equation A × X = B in least square sense.
solve(RealMatrix)
- Method in class jml.matlab.utils.
SingularValueDecompositionImpl.Solver
Solve the linear equation A × X = B in least square sense.
solve(RealMatrix, RealMatrix, RealMatrix, RealMatrix, RealMatrix, RealMatrix)
- Static method in class jml.optimization.
GeneralQP
Solve a general quadratic programming problem formulated as
solve(RealMatrix, RealMatrix, RealMatrix, RealMatrix, RealMatrix, RealMatrix)
- Static method in class jml.optimization.
GeneralQPViaPrimalDualInteriorPoint
Solve a general quadratic programming problem formulated as
solve(RealMatrix, RealMatrix, double, double, double)
- Static method in class jml.optimization.
QPWithBoundConstraints
Solve this bound constrained QP problem.
solve(RealMatrix, RealMatrix, double, double, double, RealMatrix)
- Static method in class jml.optimization.
QPWithBoundConstraints
Solve this bound constrained QP problem.
sort(RealMatrix, int, String)
- Static method in class jml.matlab.
Matlab
Sort elements of a matrix A on a direction in a specified order.
sort(RealMatrix, int)
- Static method in class jml.matlab.
Matlab
Sort elements of a matrix A on a direction in a increasing order.
sort(RealVector, String)
- Static method in class jml.matlab.
Matlab
Sort elements of a real vector V in place in a specified order.
sort2(RealMatrix, int)
- Static method in class jml.matlab.
Matlab
Sort elements of a matrix A on a direction in an increasing order.
sort2(RealMatrix)
- Static method in class jml.matlab.
Matlab
Sort elements of a matrix A column-wisely in an increasing order.
sort2(RealMatrix, int, String)
- Static method in class jml.matlab.
Matlab
Sort elements of a matrix A on a direction in a specified order.
sort3(RealMatrix, int, String)
- Static method in class jml.matlab.
Matlab
Deprecated.
sortByKey(Map<K, V>, String)
- Static method in class jml.utils.
Utility
Sort a map by its keys according to a specified order.
sortByKeys(Map<K, V>, String)
- Static method in class jml.utils.
Utility
Sort a map by its keys according to a specified order.
sortByValue(Map<K, V>, String)
- Static method in class jml.utils.
Utility
Sort a map by its values according to a specified order.
sortByValues(Map<K, V>, String)
- Static method in class jml.utils.
Utility
Sort a map by its values according to a specified order.
SortResult
- Class in
jml.matlab.utils
A wrapper for the output of sort function.
SortResult(RealMatrix, int[][])
- Constructor for class jml.matlab.utils.
SortResult
sparse(RealMatrix)
- Static method in class jml.matlab.
Matlab
Convert a dense matrix into a sparse matrix.
SparseLSA
- Class in
jml.topics
SparseLSA()
- Constructor for class jml.topics.
SparseLSA
SpectralClustering
- Class in
jml.clustering
A Java implementation for spectral clustering.
SpectralClustering()
- Constructor for class jml.clustering.
SpectralClustering
SpectralClustering(int)
- Constructor for class jml.clustering.
SpectralClustering
SpectralClustering(ClusteringOptions)
- Constructor for class jml.clustering.
SpectralClustering
SpectralClustering(SpectralClusteringOptions)
- Constructor for class jml.clustering.
SpectralClustering
SpectralClusteringOptions
- Class in
jml.options
SpectralClusteringOptions()
- Constructor for class jml.options.
SpectralClusteringOptions
Constructor with default data member values:
SpectralClusteringOptions(int)
- Constructor for class jml.options.
SpectralClusteringOptions
SpectralClusteringOptions(int, boolean, int, String, double, String, String, double)
- Constructor for class jml.options.
SpectralClusteringOptions
SpectralClusteringOptions(ClusteringOptions)
- Constructor for class jml.options.
SpectralClusteringOptions
sprintf(String, Object...)
- Static method in class jml.matlab.
Matlab
Format variables into a string.
sqrt(RealMatrix)
- Static method in class jml.matlab.
Matlab
Calculate square root for all elements of a matrix A.
startIdx
- Variable in class jml.sequence.
CRF
Index for the start state in the state space.
startIdx
- Variable in class jml.sequence.
CRFModel
Index for the start state in the state space.
state
- Static variable in class jml.optimization.
AcceleratedProximalGradient
State for the automata machine.
state
- Static variable in class jml.optimization.
BoundConstrainedPLBFGS
State for the automata machine.
state
- Static variable in class jml.optimization.
LBFGS
State for the automata machine.
state
- Static variable in class jml.optimization.
LBFGSOnSimplex
State for the automata machine.
state
- Static variable in class jml.optimization.
NonlinearConjugateGradient
State for the automata machine.
state
- Static variable in class jml.optimization.
NonnegativePLBFGS
State for the automata machine.
state
- Static variable in class jml.optimization.
PrimalDualInteriorPoint
State for the automata machine.
subplus(RealMatrix)
- Static method in class jml.matlab.
Matlab
Get the nonnegative part of a matrix A.
sum(RealMatrix)
- Static method in class jml.matlab.
Matlab
Calculate the sum of a row matrix A or its column-wise sum.
sum(RealMatrix, int)
- Static method in class jml.matlab.
Matlab
Calculate the sum of elements of A on a dimension.
sum(RealVector)
- Static method in class jml.matlab.
Matlab
Compute the sum of all elements of a vector.
sum(double[])
- Static method in class jml.operation.
ArrayOperation
Compute the sum of a 1D
double
array.
sum(double[])
- Method in class jml.sequence.
HMM
Compute the sum of a 1D
double
array.
sum2one(double[])
- Static method in class jml.operation.
ArrayOperation
Sum a 1D
double
array to one, i.e., V[i] = V[i] / sum(V).
sum2one(double[])
- Method in class jml.sequence.
HMM
Sum a 1D
double
array to one, i.e., V[i] = V[i] / sum(V).
sumAll(RealMatrix)
- Static method in class jml.matlab.
Matlab
Compute the sum of all elements of a matrix.
SupervisedFeatureSelection
- Class in
jml.feature.selection
Abstract class for supervised feature selection algorithms.
SupervisedFeatureSelection()
- Constructor for class jml.feature.selection.
SupervisedFeatureSelection
svd(RealMatrix)
- Static method in class jml.matlab.
Matlab
Compute the "economy size" matrix singular value decomposition.
Overview
Package
Class
Use
Tree
Deprecated
Index
Help
PREV LETTER
NEXT LETTER
FRAMES
NO FRAMES
All Classes
A
B
C
D
E
F
G
H
I
J
K
L
M
N
O
P
Q
R
S
T
U
V
W
X
Y
Z